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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890461.1_cds_XP_016445170.1_40153
CDS Infomation

[gene=LOC107770380] [db_xref=GeneID:107770380] [protein=clavaminate synthase-like protein At3g21360] [protein_id=XP_016445170.1] [location=join(5897..6253,6843..7096,8751..9111)] [gbkey=CDS]
Sequence

ATGGCAGAAAATTTCTTGACCCAAGTCGAAATACCTCAACAGAAGCACTACAATGGAGTT
CCTTTCCCTGCTGTTTTATCTCCGAACCCAAACTCTACTATCTCACAACTACCACAAATA
ATCAAAGAGCAAAAACCATGGTTTGGTTCTCTACTCCAACAATCTGGGGCTATTCTTTTC
AGGGGATTTCCTGTCAACTCGGCATCAGATTTTAACGATGCTGTTGAAGCTTTTGGCTAC
GAGGAACTGCCGTATGTGGGTGGTGCTGCTCCTCGTACGAACGTTGTTGGCCGTGTCTTC
ACCGCTAATGAGTCCCCGCCTGATCAAAAAATTCCTTTTCATCATGAAATGGCTCAGGTT
CCCGAGTATCCATCAAAATTGTTTTTCTTTTGTGATGTTGAACCTGGAAGTGGAGGAGAA
ACTCCAATAGTGCTGAGTCATGTTGTGTATGAGAAGATGAAGAACAAGTATCCTGATTTT
GTTGAGCGATTGGAAGAGCATGGCTTAATTTATATAAGGGTATTAGGAGAAGATGATGAT
CCCTCTTCCCCAATTGGCCGAGGCTGGAAATCAACATTTTTAACTAAAGACAAGAGCGTG
GCTGAAGAAAGGGCTGCAAAGTTGGGCATGAAGCTAGAATGGATAGAGGATGGAGTTAAA
ACCGTAATGGGCCCTATACCAGGCATCAAATTCAACCAAGAAAGGCGGCAGAAAATATGG
TTCAATAGCATGGTAGCTGCATATACCGGGTGGAAAGATGCTAGAAATGATCCAGTGAAA
GCAGTCACTTTTGGAGATGGCCAGCCTTTGCCTGCTGAAGTTATACATGATTGCTTAAGA
ATCCTTGAGGATGAAAGTGTTGCAATTCCATGGAAGAAAGGCGACGTCTTGCTGATTGAT
AATTTAGCTGTTCTTCACTCCAGGAAACCTTTCAATCCACCTCGTCGCATATTAGCTTCA
CTTTGCAAGTAA

Peptide Sequence

PEP ID

XP_016445170.1
PEP Infomation

PREDICTED: clavaminate synthase-like protein At3g21360 [Nicotiana tabacum]
Sequence

MAENFLTQVEIPQQKHYNGVPFPAVLSPNPNSTISQLPQIIKEQKPWFGSLLQQSGAILF
RGFPVNSASDFNDAVEAFGYEELPYVGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQV
PEYPSKLFFFCDVEPGSGGETPIVLSHVVYEKMKNKYPDFVERLEEHGLIYIRVLGEDDD
PSSPIGRGWKSTFLTKDKSVAEERAAKLGMKLEWIEDGVKTVMGPIPGIKFNQERRQKIW
FNSMVAAYTGWKDARNDPVKAVTFGDGQPLPAEVIHDCLRILEDESVAIPWKKGDVLLID
NLAVLHSRKPFNPPRRILASLCK

Transcript Sequence

Gene sequence data has not been registered.